Introduction | Simple Example | Choice of Gene Set Tests | Other Input Formats of Allocation Data | Other Designs than Two-Group Design | Analysis of Data from nielsen09
Package: miRtest 2.2
miRtest: Combined miRNA- And mRNA-Testing
Package for combined miRNA- and mRNA-testing.
Authors:
miRtest_2.2.tar.gz
miRtest_2.2.zip(r-4.7-any)miRtest_2.2.zip(r-4.6-any)miRtest_2.2.zip(r-4.5-any)
miRtest_2.2.tgz(r-4.6-any)miRtest_2.2.tgz(r-4.5-any)
miRtest_2.2.tar.gz(r-4.7-any)miRtest_2.2.tar.gz(r-4.6-any)
miRtest_2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
miRtest/json (API)
| # Install 'miRtest' in R: |
| install.packages('miRtest', repos = c('https://stephanartmann.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:8031a184f7. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 234 | ||
| source / vignettes | OK | 219 | ||
| linux-release | OK | 228 | ||
| macos-release | OK | 235 | ||
| macos-oldrel | OK | 245 | ||
| windows-devel | OK | 169 | ||
| windows-release | OK | 195 | ||
| windows-oldrel | OK | 169 | ||
| wasm-release | OK | 124 |
Exports:generate.Ags.testmiR.test
Dependencies:annotateAnnotationDbiaskpassBiobaseBiocBaseUtilsBiocGenericsBiostringsbitbit64blobcachemclicorpcorcpp11crayoncurlDBIdendextendfarverfastmapgenericsggplot2GlobalAncovaglobaltestgluegraphgridExtraGSEABasegtablehttrIRangesisobandjsonliteKEGGRESTlabelinglatticelifecyclelimmamagrittrMASSMatrixmemoisemimeopensslpkgconfigpngR6RColorBrewerrlangRSQLiteS4VectorsS7scalesSeqinfostatmodsurvivalsysvctrsVGAMviridisviridisLitewithrXMLxtableXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| A | A |
| Contingency table. | contingency.table |
| Fisher method of p value combination. | fisher.combination |
| Turn a data... | generate.A |
| Internal function for gene set testing. | gs.test |
| Inverse-normal method for p value combination. | inverse.normal.combination |
| Internal algorithm: Make limma test one-sided... | limma.one.sided |
| internal algorithm for author's convenience. | limma.test |
| Internal function for author's convenience and more legible code. | m.combine |
| Main Function of miRtest package. | miR.test |
| Package Description: Two-group combined miRNA- and mRNA- expression testing. | miRtest |
| X | X |
| Y | Y |