Package: miRtest 2.1
miRtest: Combined miRNA- And mRNA-Testing
Package for combined miRNA- and mRNA-testing.
Authors:
miRtest_2.1.tar.gz
miRtest_2.1.zip(r-4.5)miRtest_2.1.zip(r-4.4)miRtest_2.1.zip(r-4.3)
miRtest_2.1.tgz(r-4.4-any)miRtest_2.1.tgz(r-4.3-any)
miRtest_2.1.tar.gz(r-4.5-noble)miRtest_2.1.tar.gz(r-4.4-noble)
miRtest_2.1.tgz(r-4.4-emscripten)miRtest_2.1.tgz(r-4.3-emscripten)
miRtest.pdf |miRtest.html✨
miRtest/json (API)
# Install 'miRtest' in R: |
install.packages('miRtest', repos = c('https://stephanartmann.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 10 months agofrom:15e03b6253. Checks:OK: 6 WARNING: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 02 2024 |
R-4.5-win | OK | Nov 02 2024 |
R-4.5-linux | WARNING | Nov 02 2024 |
R-4.4-win | OK | Nov 02 2024 |
R-4.4-mac | OK | Nov 02 2024 |
R-4.3-win | OK | Nov 02 2024 |
R-4.3-mac | OK | Nov 02 2024 |
Exports:generate.Ags.testmiR.test
Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemclicolorspacecorpcorcpp11crayoncurlDBIdendextendfansifarverfastmapgenericsGenomeInfoDbGenomeInfoDbDataggplot2GlobalAncovaglobaltestgluegraphgridExtraGSEABasegtablehttrIRangesisobandjsonliteKEGGRESTlabelinglatticelifecyclelimmamagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplogrpngR6RColorBrewerrlangRSQLiteS4VectorsscalesstatmodsurvivalsystibbleUCSC.utilsutf8vctrsVGAMviridisviridisLitewithrXMLxtableXVectorzlibbioc
Readme and manuals
Help Manual
Help page | Topics |
---|---|
A | A |
Contingency table. | contingency.table |
Fisher method of p value combination. | fisher.combination |
Turn a data... | generate.A |
Internal function for gene set testing. | gs.test |
Inverse-normal method for p value combination. | inverse.normal.combination |
Internal algorithm: Make limma test one-sided... | limma.one.sided |
internal algorithm for author's convenience. | limma.test |
Internal function for author's convenience and more legible code. | m.combine |
Main Function of miRtest package. | miR.test |
Package Description: Two-group combined miRNA- and mRNA- expression testing. | miRtest |
X | X |
Y | Y |